I mentioned last week how I had a slow week and had to deal with that, little did I know it was not going to be just one week. I am not sure whether it is because Monday was a holiday or because I was still not feeling my best or because my mentor was unusually busy but this week was probably the most unproductive for me. I was able to figure out the errors I was getting from my code, which it turns out was working all along but I was running the scripts in the wrong order: there was a script that run the other scripts in series but I wanted to check if one of the scripts I changed was working so I run it before the others but it would not work because it needed some files generated from the other scripts. I also resumed work on the Open-Source project but my mentor is taking over now so I would make unit test for those. I would get to work on those next week along one other assignment. I am glad I know what I am working on ahead of time so I can get to it even if my mentor is busy. I am still feeling a little unwell but I am hoping the last three weeks are very productive. Since the I already have images of the code I worked on, I am including the pictures below to make up for this week. And just to be clear, the pictures are for the same protein but covering the different things we look at.

Figure 1: showing a roadmap

Figure 2: showing a roadmap and skeleton

Figure 3: showing a skeleton, roadmap and protein